Atom Selection

Extract a selection of atoms from a PDB file.

prody_select(selstr, *pdbs, **kwargs)

Write selected atoms from a PDB file in PDB format.

Parameters:

• selstr – atom selection string, see Atom Selections
• pdbs – PDB identifier(s) or filename(s)
• output – output filename, default is pdb_selected.pdb
• prefix – prefix for output file, default is PDB filename
• suffix – output filename suffix, default is _selected