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Release Notes

v2.0 series come with new and improved sequence, structure, and dynamics analysis features. See release notes for details.

How to Cite

Bakan A, Meireles LM, Bahar I ProDy: Protein Dynamics Inferred from Theory and Experiments
Bioinformatics 2011 27(11):1575-1577.

Bakan A, Dutta A, Mao W, Liu Y, Chennubhotla C, Lezon TR, Bahar I Evol and ProDy for Bridging Protein Sequence Evolution and Structural Dynamics
Bioinformatics 2014 30(18):2681-2683.

Applications API¶

This module contains ProDy applications.

Dynamics analysis¶

  • prody_anm()
  • prody_gnm()
  • prody_pca()

Structure analysis¶

  • prody_align()
  • prody_biomol()
  • prody_blast()
  • prody_catdcd()
  • prody_contacts()
  • prody_fetch()
  • prody_select()

Sequence analysis¶

  • evol_search()
  • evol_fetch()
  • evol_filter()
  • evol_refine()
  • evol_merge()
  • evol_conserv()
  • evol_coevol()
  • evol_occupancy()
  • evol_rankorder()

© Copyright 2010-2015, University of Pittsburgh. Last updated on Jun 23, 2021. Created using Sphinx 1.3.5.

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