ProDy 1.6 Series

1.6.1 (May 31, 2015)


  • searchPfam() uses hmmer for given sequence inputs instead of pfam search.

1.5 (Dec 23, 2013)

New Features:

  • buildPCMatrix() is implemented for calculation of coevolution with PSICOV method from multiple sequence alignments.
  • specMergeMSA() is implemented for merging multiple sequence alignment files based on the species identifiers of sequences.
  • exANM is implemented for explicit membrane ANM calculations.
  • writeMembranePDB() is implemented for writing PDB structures of created membranes for exANM class.